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  "Package": "rareNMtests",
  "Type": "Package",
  "Title": "Ecological and Biogeographical Null Model Tests for Comparing\nRarefaction Curves",
  "Version": "1.2",
  "Date": "2022-06-05",
  "Author": "Luis Cayuela and Nicholas J. Gotelli",
  "Maintainer": "Luis Cayuela <luis.cayuela@urjc.es>",
  "Description": "Randomization tests for the statistical comparison of i =\ntwo or more individual-based, sample-based or coverage-based\nrarefaction curves. The ecological null hypothesis is that the\ni samples were all drawn randomly from a single assemblage,\nwith (necessarily) a single underlying species abundance\ndistribution. The biogeographic null hypothesis is that the i\nsamples were all drawn from different assemblages that,\nnonetheless, share similar species richness and species\nabundance distributions. Functions are described in L. Cayuela,\nN.J. Gotelli & R.K. Colwell (2015) <doi:10.1890/14-1261.1>.",
  "License": "GPL (>= 2)",
  "LazyLoad": "yes",
  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "Repository": "https://luiscayuela.r-universe.dev",
  "Date/Publication": "2022-06-07 11:50:01 UTC",
  "RemoteUrl": "https://github.com/cran/rareNMtests",
  "RemoteRef": "HEAD",
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    "EcoTest.individual",
    "EcoTest.sample",
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    "plot.EcoTest",
    "rarefaction.individual",
    "rarefaction.sample"
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        "Acacia.glomerosa",
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        "Blomia.prisca",
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        "Boehmeria.caudata",
        "Boehmeria.ulmifolia",
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        "Brunellia.mexicana",
        "Buddleja.cordata",
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        "Bunchosia.gracilis",
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        "Cyrtocymura.scorpioides",
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        "Eugenia.capuli",
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        "Eugenia.oerstediana",
        "Eugenia.venezuelensis",
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        "Heliocarpus.donnellsmithii",
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        "Ilex.costaricensis",
        "Ilex.macfadyenii",
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        "Ilex.sp.",
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        "Ilex.sp5",
        "Inga.belizensis",
        "Inga.calderonii",
        "Inga.laurina",
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        "Inga.schiedeana",
        "Inga.sp",
        "Inga.sp.",
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        "Lasianthaea.fruticosum",
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        "Lonchocarpus.rugosus",
        "Lunania.mexicana",
        "Lycianthes.lenta",
        "Lysiloma.acapulcense",
        "Machaerium.cirrhiferum",
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        "Persea.schiedeana",
        "Persea.sp",
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        "Phyllonoma.laticuspis",
        "Picramnia.antidesma",
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        "Prunus.lundelliana",
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        "Quercus.segoviensis",
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        "Rhamnus.sharpii",
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    {
      "page": "BiogTest.individual",
      "title": "Biogeographical null model tests",
      "topics": [
        "BiogTest.individual",
        "BiogTest.sample",
        "plot.BiogTest"
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